simplify sbib, sdoi

This commit is contained in:
ackman678
2021-05-04 19:23:54 -07:00
parent 29956101f2
commit 61cc931e94
7 changed files with 133 additions and 156 deletions

41
sbib
View File

@@ -1,11 +1,14 @@
#!/bin/bash
if [ "$1" == "-h" ] ; then
echo "
sbib - search for citekey in a bibtex.bib (or maybe eventually bibjson.json) file and return a bibliography entry in markdown or possibly other format
sbib - search for citekey in a bibtex.bib or bibjson.json file, preview pdf, or return a bibliography entry in markdown or other format
usage:
sbib
# use 'a' flag to search all
sbib a
# use 'j' flag for bibjson quick search and preview
sbib j
# pass a custom citation style and database
sbib a citeprocStyle.csl bibdFile.json
@@ -16,6 +19,7 @@ if [ "$1" == "-h" ] ; then
bat or less
pandoc
pandoc-citeproc
zathura (or other fast pdf viewer)
echo
wl-copy
@@ -29,16 +33,12 @@ fi
#Setup defaults
cslFile=${2:-$HOME/projects/bibd/bibd-md.csl}
bibdFile=${3:-$HOME/projects/bibd/OMEGA.bib}
# bibdFile=${2:-$HOME/projects/bibd/OMEGA.json}
cd $(dirname $bibdFile)
set -e #exit if an error
#set pattern to the null character '\0' for search all, else search only cite keys
if [ "$1" == "a" ]; then
sPattern='\0'
else
sPattern="@[a-zA-Z_-]+\{"
fi
view_bib() {
# Use fzf to search citation
# Initial scroll offset is set to the line number of each line
# of git grep output *minus* 5 lines (-5)
@@ -70,3 +70,30 @@ rm $tmpName
# fzf --preview="file {}" --preview-window=down:1
echo $outCitation
echo $outCitation | wl-copy
}
view_json() {
# export citeKey=$1
# doiStr=$(jq -r '.[] | select(.id==env.citeKey).DOI' $bibdFile)
# urlStr=$(jq -r '.[] | select(.id==env.citeKey).URL' $bibdFile)
#actually this is the good one, opens pdfs quickly
jq -r '.[] | [.id, .title, .abstract, .keyword, .DOI, .PMID, .author[]?.family, .issued[]?[0]?[0], .["container-title"], .URL] | join(" ")' $bibdFile | fzf --preview 'echo {}' --preview-window=:up:70%:wrap --bind "enter:execute-silent(zathura {-1} &)"
}
#set pattern to the null character '\0' for search all, else search only cite keys
if [ "$1" == "a" ]; then
sPattern='\0'
else
sPattern="@[a-zA-Z_-]+\{"
fi
if [ "$1" == "j" ]; then
bibdFile=${3:-$HOME/projects/bibd/OMEGA.json}
view_json
else
view_bib
fi